capalyzer package

Subpackages

• capalyzer.packet_builder package
  • Subpackages
    • capalyzer.packet_builder.sub_factories package
      • Submodules
      • capalyzer.packet_builder.sub_factories.amr_factory module
      • capalyzer.packet_builder.sub_factories.ave_genome_size_factory module
      • capalyzer.packet_builder.sub_factories.constants module
      • capalyzer.packet_builder.sub_factories.hmp_comparison_factory module
      • capalyzer.packet_builder.sub_factories.macrobes module
      • capalyzer.packet_builder.sub_factories.microbe_directory module
      • capalyzer.packet_builder.sub_factories.pathway_factory module
      • capalyzer.packet_builder.sub_factories.read_proportions module
      • capalyzer.packet_builder.sub_factories.subfactory module
      • capalyzer.packet_builder.sub_factories.taxonomy_factory module
      • capalyzer.packet_builder.sub_factories.toxonomy_long_form module
      • capalyzer.packet_builder.sub_factories.utils module
      • Module contents
  • Submodules
  • capalyzer.packet_builder.api module
  • capalyzer.packet_builder.cli module
  • capalyzer.packet_builder.summary_table_factory module
  • capalyzer.packet_builder.utils module
  • Module contents
• capalyzer.packet_parser package
  • Submodules
  • capalyzer.packet_parser.cli module
  • capalyzer.packet_parser.dataframes module
  • capalyzer.packet_parser.diversity_metrics module
  • capalyzer.packet_parser.longform_parser module
  • capalyzer.packet_parser.taxa_tree module
  • Module contents

Submodules

capalyzer.cli module

capalyzer.constants module

Module contents